HL_7UNR_012

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCACGAGAAAC

Length

11 nucleotides

Bulged bases

7UNR|1|A|G|377, 7UNR|1|A|A|380

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_012 not in the Motif Atlas

Geometric match to HL_5J7L_145

Geometric discrepancy: 0.1465

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7UNR|1|A|G|373
7UNR|1|A|C|374
7UNR|1|A|A|375
7UNR|1|A|C|376
7UNR|1|A|G|377
7UNR|1|A|A|378
7UNR|1|A|G|379
7UNR|1|A|A|380
7UNR|1|A|A|381
7UNR|1|A|A|382
7UNR|1|A|C|383

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L28