HL_7UNU_013

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7UNU|1|A|G|402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNU_013 not in the Motif Atlas

Geometric match to HL_7A0S_014

Geometric discrepancy: 0.0818

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7UNU|1|A|G|401
7UNU|1|A|G|402
7UNU|1|A|A|403
7UNU|1|A|C|404
7UNU|1|A|C|405
7UNU|1|A|A|406
7UNU|1|A|U|407
7UNU|1|A|C|408

Current chains

Chain A

23S Ribosomal RNA

Nearby chains