HL_7UNU_025

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

7UNU|1|A|C|879

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNU_025 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.3928

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.6

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

7UNU|1|A|C|874
7UNU|1|A|A|875
7UNU|1|A|U|876
7UNU|1|A|C|877
7UNU|1|A|C|878
7UNU|1|A|C|879
7UNU|1|A|G|880

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13