HL_7UNV_001
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGGUAGCCUG
- Length
- 10 nucleotides
- Bulged bases
- 7UNV|1|A|G|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UNV_001 not in the Motif Atlas
- Geometric match to HL_4GXY_003
- Geometric discrepancy: 0.2428
- The information below is about HL_4GXY_003
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_65794.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
7UNV|1|A|U|59
7UNV|1|A|G|60
7UNV|1|A|G|61
7UNV|1|A|U|62
7UNV|1|A|A|63
7UNV|1|A|G|64
7UNV|1|A|C|65
7UNV|1|A|C|66
7UNV|1|A|U|67
7UNV|1|A|G|68
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L29
- Chain 6
- 50S ribosomal protein L34
- Chain V
- 50S ribosomal protein L23
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