HL_7UNV_066

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7UNV|1|A|G|2738, 7UNV|1|A|C|2742

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNV_066 not in the Motif Atlas

Geometric match to HL_4V9F_068

Geometric discrepancy: 0.088

The information below is about HL_4V9F_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7UNV|1|A|C|2732
7UNV|1|A|U|2733
7UNV|1|A|G|2734
7UNV|1|A|A|2735
7UNV|1|A|A|2736
7UNV|1|A|A|2737
7UNV|1|A|G|2738
7UNV|1|A|C|2739
7UNV|1|A|A|2740
7UNV|1|A|U|2741
7UNV|1|A|C|2742
7UNV|1|A|U|2743
7UNV|1|A|A|2744
7UNV|1|A|A|2745
7UNV|1|A|G|2746

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain G

50S ribosomal protein L6