HL_7UNW_012

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GCACGAGAAAC

Length

11 nucleotides

Bulged bases

7UNW|1|A|G|377, 7UNW|1|A|A|380

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNW_012 not in the Motif Atlas

Geometric match to HL_5J7L_145

Geometric discrepancy: 0.1686

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7UNW|1|A|G|373
7UNW|1|A|C|374
7UNW|1|A|A|375
7UNW|1|A|C|376
7UNW|1|A|G|377
7UNW|1|A|A|378
7UNW|1|A|G|379
7UNW|1|A|A|380
7UNW|1|A|A|381
7UNW|1|A|A|382
7UNW|1|A|C|383

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L28