3D structure

PDB id
7UNW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
7UNW|1|A|G|2738, 7UNW|1|A|C|2742
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UNW_065 not in the Motif Atlas
Geometric match to HL_4V9F_068
Geometric discrepancy: 0.0804
The information below is about HL_4V9F_068
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_74055.2
Basepair signature
cWW-tWH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
7

Unit IDs

7UNW|1|A|C|2732
7UNW|1|A|U|2733
7UNW|1|A|G|2734
7UNW|1|A|A|2735
7UNW|1|A|A|2736
7UNW|1|A|A|2737
7UNW|1|A|G|2738
7UNW|1|A|C|2739
7UNW|1|A|A|2740
7UNW|1|A|U|2741
7UNW|1|A|C|2742
7UNW|1|A|U|2743
7UNW|1|A|A|2744
7UNW|1|A|A|2745
7UNW|1|A|G|2746

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 8
50S ribosomal protein L36
Chain G
50S ribosomal protein L6

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0797 s