HL_7UNW_065

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7UNW|1|A|G|2738, 7UNW|1|A|C|2742

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNW_065 not in the Motif Atlas

Geometric match to HL_4V9F_068

Geometric discrepancy: 0.0804

The information below is about HL_4V9F_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7UNW|1|A|C|2732
7UNW|1|A|U|2733
7UNW|1|A|G|2734
7UNW|1|A|A|2735
7UNW|1|A|A|2736
7UNW|1|A|A|2737
7UNW|1|A|G|2738
7UNW|1|A|C|2739
7UNW|1|A|A|2740
7UNW|1|A|U|2741
7UNW|1|A|C|2742
7UNW|1|A|U|2743
7UNW|1|A|A|2744
7UNW|1|A|A|2745
7UNW|1|A|G|2746

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain G

50S ribosomal protein L6