HL_7UPH_001
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- 7UPH|1|I|U|13
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UPH_001 not in the Motif Atlas
- Homologous match to HL_4LFB_001
- Geometric discrepancy: 0.1858
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7UPH|1|I|U|11
7UPH|1|I|U|12
7UPH|1|I|U|13
7UPH|1|I|G|14
7UPH|1|I|A|15
7UPH|1|I|U|16
7UPH|1|I|C|17
7UPH|1|I|A|18
7UPH|1|I|U|19
7UPH|1|I|G|20
7UPH|1|I|G|21
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain Z
- 30S ribosomal protein S5
- Chain g
- 30S ribosomal protein S12
Coloring options: