HL_7UPH_015
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UPH_015 not in the Motif Atlas
- Homologous match to HL_5J7L_015
- Geometric discrepancy: 0.2072
- The information below is about HL_5J7L_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7UPH|1|I|C|688
7UPH|1|I|G|689
7UPH|1|I|G|690
7UPH|1|I|U|691
7UPH|1|I|G|692
7UPH|1|I|A|693
7UPH|1|I|A|694
7UPH|1|I|A|695
7UPH|1|I|U|696
7UPH|1|I|G|697
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain H
- 30S ribosomal protein S21
- Chain b
- 30S ribosomal protein S7
- Chain f
- 30S ribosomal protein S11
Coloring options: