HL_7UPH_067

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

7UPH|1|I|C|2987

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UPH_067 not in the Motif Atlas

Geometric match to HL_1ZBH_001

Geometric discrepancy: 0.2783

The information below is about HL_1ZBH_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_56334.1

Basepair signature

cWW-F

Number of instances in this motif group

16

Unit IDs

7UPH|1|I|G|2986
7UPH|1|I|C|2987
7UPH|1|I|A|2988
7UPH|1|I|A|2989
7UPH|1|I|A|2990
7UPH|1|I|U|2991
7UPH|1|I|C|2992

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain K

50S ribosomal protein L2