HL_7UVW_012

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GCACGUGAAAC

Length

11 nucleotides

Bulged bases

7UVW|1|A|G|385, 7UVW|1|A|A|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1393

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7UVW|1|A|G|381
7UVW|1|A|C|382
7UVW|1|A|A|383
7UVW|1|A|C|384
7UVW|1|A|G|385
7UVW|1|A|U|386
7UVW|1|A|G|387
7UVW|1|A|A|388
7UVW|1|A|A|389
7UVW|1|A|A|390
7UVW|1|A|C|391

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L28

Chain v

Transfer RNA; tRNA