HL_7UVY_012

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

GCACGUGAAAC

Length

11 nucleotides

Bulged bases

7UVY|1|A|G|385, 7UVY|1|A|A|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVY_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1259

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7UVY|1|A|G|381
7UVY|1|A|C|382
7UVY|1|A|A|383
7UVY|1|A|C|384
7UVY|1|A|G|385
7UVY|1|A|U|386
7UVY|1|A|G|387
7UVY|1|A|A|388
7UVY|1|A|A|389
7UVY|1|A|A|390
7UVY|1|A|C|391

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L28