HL_7WTU_030

3D structure

PDB id

7WTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGAAC

Length

6 nucleotides

Bulged bases

7WTU|1|2|U|1848

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WTU_030 not in the Motif Atlas

Geometric match to HL_4LX6_002

Geometric discrepancy: 0.3996

The information below is about HL_4LX6_002

Detailed Annotation

Purine riboswitch

Broad Annotation

Purine riboswitch

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

7WTU|1|2|G|1847
7WTU|1|2|U|1848
7WTU|1|2|G|1849
7WTU|1|2|A|1850
7WTU|1|2|A|1851
7WTU|1|2|C|1852

Current chains

Chain 2

18S rRNA

Nearby chains