HL_7WU0_032

3D structure

PDB id

7WU0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUGAAC

Length

6 nucleotides

Bulged bases

7WU0|1|2|U|1848

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WU0_032 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3551

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7WU0|1|2|G|1847
7WU0|1|2|U|1848
7WU0|1|2|G|1849
7WU0|1|2|A|1850
7WU0|1|2|A|1851
7WU0|1|2|C|1852

Current chains

Chain 2

18S rRNA

Nearby chains

Chain t

Protein LTV1 homolog

Chain v

Serine/threonine-protein kinase RIO2