HL_7YLA_012

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7YLA|1|I|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7YLA_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1575

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7YLA|1|I|A|382
7YLA|1|I|C|383
7YLA|1|I|A|384
7YLA|1|I|C|385
7YLA|1|I|G|386
7YLA|1|I|U|387
7YLA|1|I|G|388
7YLA|1|I|G|389
7YLA|1|I|U|390
7YLA|1|I|A|391
7YLA|1|I|U|392

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain f

50S ribosomal protein L28