HL_7Z20_028
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- UGCUAACG
- Length
- 8 nucleotides
- Bulged bases
- 7Z20|1|b|U|957, 7Z20|1|b|C|960
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Z20_028 not in the Motif Atlas
- Geometric match to HL_4WF9_027
- Geometric discrepancy: 0.0987
- The information below is about HL_4WF9_027
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
7Z20|1|b|U|954
7Z20|1|b|G|955
7Z20|1|b|C|956
7Z20|1|b|U|957
7Z20|1|b|A|958
7Z20|1|b|A|959
7Z20|1|b|C|960
7Z20|1|b|G|961
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain m
- 50S ribosomal protein L16
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