HL_7Z20_052
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 7Z20|1|b|A|2029, 7Z20|1|b|A|2030, 7Z20|1|b|G|2031
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Z20_052 not in the Motif Atlas
- Geometric match to HL_4WF9_047
- Geometric discrepancy: 0.1092
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7Z20|1|b|G|2026
7Z20|1|b|U|2027
7Z20|1|b|G|2028
7Z20|1|b|A|2029
7Z20|1|b|A|2030
7Z20|1|b|G|2031
7Z20|1|b|A|2032
7Z20|1|b|U|2033
7Z20|1|b|G|2034
7Z20|1|b|C|2035
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L32
- Chain d
- 50S ribosomal protein L3
- Chain r
- 50S ribosomal protein L21
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