HL_7Z20_068
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 7Z20|1|b|G|2750, 7Z20|1|b|C|2754
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Z20_068 not in the Motif Atlas
- Geometric match to HL_5J7L_199
- Geometric discrepancy: 0.0572
- The information below is about HL_5J7L_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
7Z20|1|b|C|2744
7Z20|1|b|U|2745
7Z20|1|b|G|2746
7Z20|1|b|A|2747
7Z20|1|b|A|2748
7Z20|1|b|A|2749
7Z20|1|b|G|2750
7Z20|1|b|C|2751
7Z20|1|b|A|2752
7Z20|1|b|U|2753
7Z20|1|b|C|2754
7Z20|1|b|U|2755
7Z20|1|b|A|2756
7Z20|1|b|A|2757
7Z20|1|b|G|2758
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain g
- 50S ribosomal protein L6
- Chain j
- 50S ribosomal protein L13
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