HL_7Z20_072
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 7Z20|1|v|G|19, 7Z20|1|v|G|20, 7Z20|1|v|U|20|||A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Z20_072 not in the Motif Atlas
- Geometric match to HL_5B63_003
- Geometric discrepancy: 0.1502
- The information below is about HL_5B63_003
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20490.1
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 13
Unit IDs
7Z20|1|v|C|13
7Z20|1|v|A|14
7Z20|1|v|G|15
7Z20|1|v|C|16
7Z20|1|v|C|17
7Z20|1|v|U|18
7Z20|1|v|G|19
7Z20|1|v|G|20
7Z20|1|v|U|20|||A
7Z20|1|v|A|21
7Z20|1|v|G|22
Current chains
- Chain v
- Pro-tRNA
Nearby chains
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
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