HL_7Z20_073

3D structure

PDB id

7Z20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

CGUUCGGGACG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z20_073 not in the Motif Atlas

Homologous match to HL_4V7M_033

Geometric discrepancy: 0.2497

The information below is about HL_4V7M_033

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Z20|1|v|C|30
7Z20|1|v|G|31
7Z20|1|v|U|32
7Z20|1|v|U|33
7Z20|1|v|C|34
7Z20|1|v|G|35
7Z20|1|v|G|36
7Z20|1|v|G|37
7Z20|1|v|A|38
7Z20|1|v|C|39
7Z20|1|v|G|40

Current chains

Chain v

Pro-tRNA

Nearby chains