HL_7Z34_025

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

7Z34|1|1|U|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z34_025 not in the Motif Atlas

Homologous match to HL_8C3A_024

Geometric discrepancy: 0.2051

The information below is about HL_8C3A_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7Z34|1|1|C|1076
7Z34|1|1|U|1077
7Z34|1|1|U|1078
7Z34|1|1|A|1079
7Z34|1|1|A|1080
7Z34|1|1|U|1081
7Z34|1|1|U|1082
7Z34|1|1|G|1083

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain D

60S ribosomal protein L5

Chain T

60S ribosomal protein L21-A

Chain o

60S ribosomal protein L29