HL_7Z34_040

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACCUUU

Length

6 nucleotides

Bulged bases

7Z34|1|1|C|1762, 7Z34|1|1|U|1764

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z34_040 not in the Motif Atlas

Homologous match to HL_8C3A_039

Geometric discrepancy: 0.5463

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7Z34|1|1|A|1760
7Z34|1|1|C|1761
7Z34|1|1|C|1762
7Z34|1|1|U|1763
7Z34|1|1|U|1764
7Z34|1|1|U|1765

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain 4

Probable metalloprotease ARX1

Chain R

60S ribosomal protein L19-A

Chain b

Nucleolar GTP-binding protein 1