HL_7Z34_056

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCAUUCGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z34_056 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.383

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

7Z34|1|1|C|2567
7Z34|1|1|C|2568
7Z34|1|1|A|2569
7Z34|1|1|U|2570
7Z34|1|1|U|2571
7Z34|1|1|C|2572
7Z34|1|1|G|2573
7Z34|1|1|G|2574

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27-A