HL_7Z34_059

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AACAGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z34_059 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.1598

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7Z34|1|1|A|2673
7Z34|1|1|A|2674
7Z34|1|1|C|2675
7Z34|1|1|A|2676
7Z34|1|1|G|2677
7Z34|1|1|A|2678
7Z34|1|1|A|2679
7Z34|1|1|A|2680
7Z34|1|1|U|2681

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain J

60S ribosomal protein L11-A