HL_7Z34_077
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGAAUUGCAGAAUUCCGUGAAUC
- Length
- 24 nucleotides
- Bulged bases
- 7Z34|1|3|C|84, 7Z34|1|3|U|86, 7Z34|1|3|U|90
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Z34_077 not in the Motif Atlas
- Homologous match to HL_8C3A_075
- Geometric discrepancy: 0.5329
- The information below is about HL_8C3A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07882.1
- Basepair signature
- cWW-F-F-tSH-tHS-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7Z34|1|3|G|68
7Z34|1|3|U|69
7Z34|1|3|G|70
7Z34|1|3|A|71
7Z34|1|3|A|72
7Z34|1|3|U|73
7Z34|1|3|U|74
7Z34|1|3|G|75
7Z34|1|3|C|76
7Z34|1|3|A|77
7Z34|1|3|G|78
7Z34|1|3|A|79
7Z34|1|3|A|80
7Z34|1|3|U|81
7Z34|1|3|U|82
7Z34|1|3|C|83
7Z34|1|3|C|84
7Z34|1|3|G|85
7Z34|1|3|U|86
7Z34|1|3|G|87
7Z34|1|3|A|88
7Z34|1|3|A|89
7Z34|1|3|U|90
7Z34|1|3|C|91
Current chains
- Chain 3
- 5.8S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- Probable metalloprotease ARX1
- Chain Y
- 60S ribosomal protein L26-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain h
- 60S ribosomal protein L35-A
- Chain j
- 60S ribosomal protein L37-A
- Chain l
- 60S ribosomal protein L39
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