HL_7Z3O_023

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUCAG

Length

6 nucleotides

Bulged bases

7Z3O|1|1|C|941, 7Z3O|1|1|A|944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_023 not in the Motif Atlas

Homologous match to HL_5TBW_022

Geometric discrepancy: 0.3599

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7Z3O|1|1|C|940
7Z3O|1|1|C|941
7Z3O|1|1|U|942
7Z3O|1|1|C|943
7Z3O|1|1|A|944
7Z3O|1|1|G|945

Current chains

Chain 1

26S rRNA

Nearby chains

Chain La

60S ribosomal protein L28-like protein

Chain Lb

60S ribosomal protein L29

Chain Lo

60S ribosomal protein L44-like protein