3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CUCGAAGUG
Length
9 nucleotides
Bulged bases
7Z3O|1|1|A|3186, 7Z3O|1|1|A|3187
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7Z3O_069 not in the Motif Atlas
Geometric match to HL_3SKL_006
Geometric discrepancy: 0.3109
The information below is about HL_3SKL_006
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_47100.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
4

Unit IDs

7Z3O|1|1|C|3182
7Z3O|1|1|U|3183
7Z3O|1|1|C|3184
7Z3O|1|1|G|3185
7Z3O|1|1|A|3186
7Z3O|1|1|A|3187
7Z3O|1|1|G|3188
7Z3O|1|1|U|3189
7Z3O|1|1|G|3190

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LB
60S ribosomal protein L3-like protein
Chain LO
60S ribosomal protein L16-like protein

Coloring options:


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