HL_7Z3O_089

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUAUG

Length

6 nucleotides

Bulged bases

7Z3O|1|2|C|777, 7Z3O|1|2|U|778, 7Z3O|1|2|U|780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_089 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3098

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7Z3O|1|2|C|776
7Z3O|1|2|C|777
7Z3O|1|2|U|778
7Z3O|1|2|A|779
7Z3O|1|2|U|780
7Z3O|1|2|G|781

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4

Chain SY

40S ribosomal protein S24