HL_7Z3O_091

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_091 not in the Motif Atlas

Homologous match to HL_4V88_206

Geometric discrepancy: 0.1424

The information below is about HL_4V88_206

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7Z3O|1|2|A|898
7Z3O|1|2|G|899
7Z3O|1|2|G|900
7Z3O|1|2|U|901
7Z3O|1|2|G|902
7Z3O|1|2|A|903
7Z3O|1|2|A|904
7Z3O|1|2|A|905
7Z3O|1|2|U|906
7Z3O|1|2|U|907

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SB

40S ribosomal protein S1

Chain SF

40S ribosomal protein s5-like protein

Chain SO

40S ribosomal protein S14-like protein