HL_7Z3O_093

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAUCAGAUACC

Length

11 nucleotides

Bulged bases

7Z3O|1|2|U|1002

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_093 not in the Motif Atlas

Homologous match to HL_4V88_208

Geometric discrepancy: 0.1364

The information below is about HL_4V88_208

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7Z3O|1|2|G|995
7Z3O|1|2|A|996
7Z3O|1|2|U|997
7Z3O|1|2|C|998
7Z3O|1|2|A|999
7Z3O|1|2|G|1000
7Z3O|1|2|A|1001
7Z3O|1|2|U|1002
7Z3O|1|2|A|1003
7Z3O|1|2|C|1004
7Z3O|1|2|C|1005

Current chains

Chain 2

18S rRNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain B

HABP4_PAI-RBP1 domain-containing protein

Chain SO

40S ribosomal protein S14-like protein