HL_7Z3O_094

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAUUUUUG

Length

9 nucleotides

Bulged bases

7Z3O|1|2|U|1056

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_094 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.3032

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7Z3O|1|2|U|1053
7Z3O|1|2|U|1054
7Z3O|1|2|A|1055
7Z3O|1|2|U|1056
7Z3O|1|2|U|1057
7Z3O|1|2|U|1058
7Z3O|1|2|U|1059
7Z3O|1|2|U|1060
7Z3O|1|2|G|1061

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SB

40S ribosomal protein S1

Chain Sb

Ribosomal protein s27-like protein