HL_7Z3O_114

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGGUAAGCA

Length

9 nucleotides

Bulged bases

7Z3O|1|1|G|1114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_114 not in the Motif Atlas

Geometric match to HL_3RG5_006

Geometric discrepancy: 0.2947

The information below is about HL_3RG5_006

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_87268.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7Z3O|1|1|U|1108
7Z3O|1|1|G|1109
7Z3O|1|1|G|1110
7Z3O|1|1|U|1111
7Z3O|1|1|A|1112
7Z3O|1|1|A|1113
7Z3O|1|1|G|1114
7Z3O|1|1|C|1115
7Z3O|1|1|A|1116

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10-like protein

Chain Lb

60S ribosomal protein L29