HL_7ZJW_029
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CCUUCCAGUCCG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZJW_029 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.1583
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
7ZJW|1|L5|C|1392
7ZJW|1|L5|C|1393
7ZJW|1|L5|U|1394
7ZJW|1|L5|U|1395
7ZJW|1|L5|C|1396
7ZJW|1|L5|C|1397
7ZJW|1|L5|A|1398
7ZJW|1|L5|G|1399
7ZJW|1|L5|U|1400
7ZJW|1|L5|C|1401
7ZJW|1|L5|C|1402
7ZJW|1|L5|G|1403
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4
- Chain LI
- 60S ribosomal Protein uL30
- Chain LT
- 60S ribosomal Protein eL18
- Chain Le
- 60S ribosomal protein L29
Coloring options: