HL_7ZJW_112
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- 7ZJW|1|S2|G|892
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZJW_112 not in the Motif Atlas
- Homologous match to HL_8C3A_210
- Geometric discrepancy: 0.5414
- The information below is about HL_8C3A_210
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08554.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7ZJW|1|S2|U|886
7ZJW|1|S2|A|887
7ZJW|1|S2|U|888
7ZJW|1|S2|U|889
7ZJW|1|S2|U|890
7ZJW|1|S2|U|891
7ZJW|1|S2|G|892
7ZJW|1|S2|U|893
7ZJW|1|S2|U|894
7ZJW|1|S2|G|895
7ZJW|1|S2|G|896
7ZJW|1|S2|U|897
7ZJW|1|S2|U|898
7ZJW|1|S2|U|899
7ZJW|1|S2|U|900
7ZJW|1|S2|C|901
7ZJW|1|S2|G|902
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SR
- 40S ribosomal protein S6
- Chain SW
- 40S ribosomal protein S11
Coloring options: