HL_7ZJX_091
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUGACUC
- Length
- 8 nucleotides
- Bulged bases
- 7ZJX|1|S2|U|295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZJX_091 not in the Motif Atlas
- Geometric match to HL_4V88_191
- Geometric discrepancy: 0.2256
- The information below is about HL_4V88_191
- Detailed Annotation
- T-loop with 1 bulged base
- Broad Annotation
- T-loop
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7ZJX|1|S2|G|289
7ZJX|1|S2|G|290
7ZJX|1|S2|U|291
7ZJX|1|S2|G|292
7ZJX|1|S2|A|293
7ZJX|1|S2|C|294
7ZJX|1|S2|U|295
7ZJX|1|S2|C|296
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SP
- 40S ribosomal protein S4
- Chain SR
- 40S ribosomal protein S6
- Chain SW
- 40S ribosomal protein S11
Coloring options: