HL_7ZP8_016

3D structure

PDB id

7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZP8_016 not in the Motif Atlas

Geometric match to HL_4LFB_028

Geometric discrepancy: 0.1215

The information below is about HL_4LFB_028

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7ZP8|1|b|C|462
7ZP8|1|b|G|463
7ZP8|1|b|U|464
7ZP8|1|b|G|465
7ZP8|1|b|A|466
7ZP8|1|b|G|467

Current chains

Chain b

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L34

Chain e

50S ribosomal protein L4

Chain z

Gelation factor