HL_7ZP8_051

3D structure

PDB id

7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7ZP8|1|b|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZP8_051 not in the Motif Atlas

Geometric match to HL_5J7L_182

Geometric discrepancy: 0.1693

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7ZP8|1|b|G|1949
7ZP8|1|b|G|1950
7ZP8|1|b|U|1951
7ZP8|1|b|A|1952
7ZP8|1|b|A|1953
7ZP8|1|b|G|1954
7ZP8|1|b|U|1955
7ZP8|1|b|U|1956
7ZP8|1|b|C|1957

Current chains

Chain b

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L14