HL_7ZPQ_012
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- UAAUUCA
- Length
- 7 nucleotides
- Bulged bases
- 7ZPQ|1|2|A|452, 7ZPQ|1|2|U|454, 7ZPQ|1|2|C|455
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZPQ_012 not in the Motif Atlas
- Homologous match to HL_4V88_197
- Geometric discrepancy: 0.2981
- The information below is about HL_4V88_197
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80922.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7ZPQ|1|2|U|450
7ZPQ|1|2|A|451
7ZPQ|1|2|A|452
7ZPQ|1|2|U|453
7ZPQ|1|2|U|454
7ZPQ|1|2|C|455
7ZPQ|1|2|A|456
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AE
- 40S ribosomal protein S4-A
- Chain AY
- 40S ribosomal protein S24-A
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