HL_7ZPQ_023
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7ZPQ|1|2|U|1004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZPQ_023 not in the Motif Atlas
- Homologous match to HL_4V88_208
- Geometric discrepancy: 0.1044
- The information below is about HL_4V88_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
7ZPQ|1|2|G|997
7ZPQ|1|2|A|998
7ZPQ|1|2|U|999
7ZPQ|1|2|C|1000
7ZPQ|1|2|A|1001
7ZPQ|1|2|G|1002
7ZPQ|1|2|A|1003
7ZPQ|1|2|U|1004
7ZPQ|1|2|A|1005
7ZPQ|1|2|C|1006
7ZPQ|1|2|C|1007
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain 6
- Transfer RNA; tRNA
- Chain AO
- 40S ribosomal protein S14-B
- Chain Aa
- RPS26B isoform 1
Coloring options: