HL_7ZQ5_022

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

7ZQ5|1|b|C|645

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ5_022 not in the Motif Atlas

Geometric match to HL_3D0U_003

Geometric discrepancy: 0.3034

The information below is about HL_3D0U_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

7ZQ5|1|b|U|641
7ZQ5|1|b|U|642
7ZQ5|1|b|A|643
7ZQ5|1|b|A|644
7ZQ5|1|b|C|645
7ZQ5|1|b|U|646
7ZQ5|1|b|G|647

Current chains

Chain b

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L33

Chain 7

50S ribosomal protein L35