HL_7ZQ5_024

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

7ZQ5|1|b|U|747, 7ZQ5|1|b|A|751, 7ZQ5|1|b|A|752

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ5_024 not in the Motif Atlas

Geometric match to HL_7A0S_022

Geometric discrepancy: 0.0906

The information below is about HL_7A0S_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

7ZQ5|1|b|U|744
7ZQ5|1|b|G|745
7ZQ5|1|b|U|746
7ZQ5|1|b|U|747
7ZQ5|1|b|G|748
7ZQ5|1|b|A|749
7ZQ5|1|b|A|750
7ZQ5|1|b|A|751
7ZQ5|1|b|A|752
7ZQ5|1|b|A|753

Current chains

Chain b

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L32

Chain 6

50S ribosomal protein L34

Chain d

50S ribosomal protein L3

Chain s

50S ribosomal protein L22