3D structure

PDB id
7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S E. coli ribosome with truncated uL23 and uL24 loops
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
UGAAAGG
Length
7 nucleotides
Bulged bases
7ZQ5|1|b|A|781, 7ZQ5|1|b|G|784
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZQ5_025 not in the Motif Atlas
Geometric match to HL_2NUE_001
Geometric discrepancy: 0.3245
The information below is about HL_2NUE_001
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_53890.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
15

Unit IDs

7ZQ5|1|b|U|779
7ZQ5|1|b|G|780
7ZQ5|1|b|A|781
7ZQ5|1|b|A|782
7ZQ5|1|b|A|783
7ZQ5|1|b|G|784
7ZQ5|1|b|G|785

Current chains

Chain b
23S rRNA

Nearby chains

Chain c
50S ribosomal protein L2

Coloring options:


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