HL_7ZQ5_050

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ5_050 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.2164

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7ZQ5|1|b|G|1910
7ZQ5|1|b|U|1911
7ZQ5|1|b|A|1912
7ZQ5|1|b|A|1913
7ZQ5|1|b|C|1914
7ZQ5|1|b|U|1915
7ZQ5|1|b|A|1916
7ZQ5|1|b|U|1917
7ZQ5|1|b|A|1918
7ZQ5|1|b|A|1919
7ZQ5|1|b|C|1920

Current chains

Chain b

23S rRNA

Nearby chains