HL_7ZQ6_002

3D structure

PDB id

7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CUUGCCAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ6_002 not in the Motif Atlas

Geometric match to HL_7U2I_104

Geometric discrepancy: 0.1324

The information below is about HL_7U2I_104

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_06059.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

51

Unit IDs

7ZQ6|1|M|C|31
7ZQ6|1|M|U|32
7ZQ6|1|M|U|33
7ZQ6|1|M|G|34
7ZQ6|1|M|C|35
7ZQ6|1|M|C|36
7ZQ6|1|M|A|37
7ZQ6|1|M|A|38
7ZQ6|1|M|G|39

Current chains

Chain M

Gly-tRNA

Nearby chains