HL_7ZQ6_016
3D structure
- PDB id
- 7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 7ZQ6|1|b|G|329, 7ZQ6|1|b|A|330, 7ZQ6|1|b|C|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZQ6_016 not in the Motif Atlas
- Geometric match to HL_5J7L_144
- Geometric discrepancy: 0.0759
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
7ZQ6|1|b|G|327
7ZQ6|1|b|U|328
7ZQ6|1|b|G|329
7ZQ6|1|b|A|330
7ZQ6|1|b|C|331
7ZQ6|1|b|A|332
7ZQ6|1|b|G|333
7ZQ6|1|b|C|334
7ZQ6|1|b|C|335
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain e
- 50S ribosomal protein L4
- Chain u
- 50S ribosomal protein L24
Coloring options: