HL_7ZQ6_032

3D structure

PDB id

7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ6_032 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1486

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7ZQ6|1|b|G|978
7ZQ6|1|b|A|979
7ZQ6|1|b|A|980
7ZQ6|1|b|A|981
7ZQ6|1|b|C|982
7ZQ6|1|b|A|983
7ZQ6|1|b|A|984
7ZQ6|1|b|C|985

Current chains

Chain b

23S rRNA

Nearby chains

Chain q

50S ribosomal protein L20

Chain r

50S ribosomal protein L21