HL_7ZRS_027
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 7ZRS|1|2|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZRS_027 not in the Motif Atlas
- Homologous match to HL_4V88_212
- Geometric discrepancy: 0.1485
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7ZRS|1|2|G|1188
7ZRS|1|2|A|1189
7ZRS|1|2|C|1190
7ZRS|1|2|U|1191
7ZRS|1|2|C|1192
7ZRS|1|2|A|1193
7ZRS|1|2|A|1194
7ZRS|1|2|C|1195
7ZRS|1|2|A|1196
7ZRS|1|2|C|1197
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain AQ
- 40S ribosomal protein S16-A
- Chain AU
- RPS20 isoform 1
- Chain Ad
- RPS29A isoform 1
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