HL_7ZRS_038
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- UGAAUUGCAGAAUUCCGUGAA
- Length
- 21 nucleotides
- Bulged bases
- 7ZRS|1|3|C|84, 7ZRS|1|3|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZRS_038 not in the Motif Atlas
- Homologous match to HL_8P4V_073
- Geometric discrepancy: 0.2088
- The information below is about HL_8P4V_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08513.2
- Basepair signature
- cWW-tSH-tSS-tHS-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7ZRS|1|3|U|69
7ZRS|1|3|G|70
7ZRS|1|3|A|71
7ZRS|1|3|A|72
7ZRS|1|3|U|73
7ZRS|1|3|U|74
7ZRS|1|3|G|75
7ZRS|1|3|C|76
7ZRS|1|3|A|77
7ZRS|1|3|G|78
7ZRS|1|3|A|79
7ZRS|1|3|A|80
7ZRS|1|3|U|81
7ZRS|1|3|U|82
7ZRS|1|3|C|83
7ZRS|1|3|C|84
7ZRS|1|3|G|85
7ZRS|1|3|U|86
7ZRS|1|3|G|87
7ZRS|1|3|A|88
7ZRS|1|3|A|89
Current chains
- Chain 3
- 5.8S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BX
- 60S ribosomal protein L26-A
- Chain Bg
- 60S ribosomal protein L35-A
- Chain Bi
- 60S ribosomal protein L37-A
- Chain Bk
- 60S ribosomal protein L39
Coloring options: