HL_7ZRS_069

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

7ZRS|1|5|A|1246

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_069 not in the Motif Atlas

Homologous match to HL_5TBW_027

Geometric discrepancy: 0.3389

The information below is about HL_5TBW_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7ZRS|1|5|C|1240
7ZRS|1|5|A|1241
7ZRS|1|5|U|1242
7ZRS|1|5|G|1243
7ZRS|1|5|G|1244
7ZRS|1|5|A|1245
7ZRS|1|5|A|1246
7ZRS|1|5|G|1247
7ZRS|1|5|U|1248
7ZRS|1|5|C|1249
7ZRS|1|5|G|1250

Current chains

Chain 5

25S ribosomal RNA

Nearby chains