HL_7ZRS_070

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_070 not in the Motif Atlas

Homologous match to HL_8C3A_028

Geometric discrepancy: 0.3423

The information below is about HL_8C3A_028

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7ZRS|1|5|U|1268
7ZRS|1|5|G|1269
7ZRS|1|5|U|1270
7ZRS|1|5|A|1271
7ZRS|1|5|A|1272
7ZRS|1|5|C|1273
7ZRS|1|5|A|1274
7ZRS|1|5|A|1275

Current chains

Chain 5

25S ribosomal RNA

Nearby chains